Magnifying glass over R&D tax credit subcontracting assessment form

Navigating the Shifting Sands: Subcontracting & Subsidies in R&D Tax Credits

The UK's R&D tax relief schemes are a fantastic incentive for innovation, injecting valuable cash back into businesses pushing boundaries. However, navigating the rules can feel like walking a tightrope, particularly when it comes to two intertwined areas: Subcontracting and Subsidised Expenditure. Recent years have seen significant shifts in HMRC's stance and crucial Tribunal decisions, creating a complex landscape that demands careful attention. If you engage subcontractors or are subcontracted to for development work, understanding this history – and the significant changes effective from April 2024 – is vital.

The Subcontracting Conundrum: Who Gets to Claim?

Imagine this common scenario: Company A needs a specific solution and commissions Company B to develop it. R&D undoubtedly happens during the project. But who holds the golden ticket for claiming tax relief?

It seems simple on the surface, but the reality is often murky:

The Turning Point: HMRC vs Quinn (2016)

A key moment arrived in 2016 with the First-tier Tribunal (FTT) case HMRC v Quinn (London) Ltd. HMRC argued that Quinn was effectively being subcontracted to by its client, making Quinn ineligible for the more generous SME scheme claim. However, the Tribunal disagreed, looking closely at the substance of the arrangement – factors like who bore the financial risk and who had overall control of the R&D activities. They sided with Quinn.

Crucially, HMRC chose not to appeal this decision to the Upper Tribunal (which could have set a legally binding precedent). Instead, they amended their internal guidance, specifically within the Corporate Intangibles Research and Development (CIRD) Manual (notably around CIRD82150). This revised guidance adopted a much stricter interpretation, often creating a presumption that work done for a customer was R&D subcontracted to the claimant (Company B), unless the claimant could strongly prove otherwise. This shift made it significantly harder for many innovative subcontractors to claim under the SME scheme, even if they were taking the risks and driving the R&D.

The "Subsidy Squeeze": A Double Challenge Under the Old Rules

Adding fuel to the fire, HMRC often deployed a related argument concerning Subsidised Expenditure, particularly relevant before the major scheme changes in 2024.

Understanding the Pre-April 2024 Subsidy Rules: The rules historically stated that if R&D expenditure was subsidised, it generally could not be claimed under the SME scheme. This restriction stemmed from specific R&D tax relief legislation covering subsidised expenditure.

State Aid Factor: One significant reason was that the SME scheme itself was classified as a form of notified state aid. Therefore, receiving other notified state aid (like specific governmental grants designated as state aid) for the same R&D expenditure created a direct conflict under state aid regulations, preventing an SME claim for that subsidised portion.

Broader Subsidy Rule: However, the restriction wasn't limited only to notified state aid subsidies. The legislation generally disallowed SME scheme claims for R&D expenditure that was subsidised in any way, regardless of whether the subsidy itself was formally classified as state aid or came from another source (like non-state aid grants or even, controversially, certain customer payments).

This broad interpretation meant that receiving any form of relevant subsidy or grant for specific R&D costs could render that expenditure ineligible for the more generous SME relief. The consequence? Potentially being forced onto the less favourable Research and Development Expenditure Credit (RDEC) scheme for that expenditure, significantly reducing the value of the claim. Crucially, the RDEC scheme was not considered notified state aid and did not have the same broad restrictions on claiming for subsidised expenditure, so subsidies generally didn't impact RDEC eligibility in the same way.

HMRC sometimes controversially argued that the payment received by Company B from Company A for contracted work could itself be considered a 'subsidy' in this context, leveraging these broad SME scheme rules. Although HMRC's interpretation was sometimes successfully challenged, the risk that they might treat customer payments as subsidies created uncertainty for companies making SME claims before 1 April 2024.

The Pendulum Swings Back? Collins (2020) & Stage One (2021)

The strict post-Quinn guidance faced challenges in later tribunals. Cases like G D Collins (Construction) Ltd (2020) and Stage One Creative Services Ltd (2021) saw the FTT again push back against a tick-box approach.

Referencing the principles established in Quinn, these tribunals re-emphasised the need to look at the commercial reality and substance of the arrangement:

These decisions signalled a move away from HMRC's broadest interpretations and back towards a more holistic assessment of the facts, even under the old scheme rules.

Where Do We Stand Now? Clarity Emerging, New Rules, Lingering Complexity

The landscape today is different. While the Collins and Stage One cases provided balance under the old rules, the fundamental structure of R&D relief has now changed.

HMRC's guidance continues to evolve, but the difficulty in accessing and comparing precise historical versions of the CIRD manual still makes definitively tracking past subtle shifts challenging.

The Merged Scheme and Subsidies (Post-April 2024): A major change is the effective merger of the SME and RDEC schemes into a single, RDEC-like mechanism for accounting periods beginning on or after 1 April 2024. This new merged scheme significantly alters the picture regarding subsidies. Because the new scheme operates like the old RDEC (which wasn't state aid), the rule preventing claims for subsidised expenditure under the old SME scheme generally no longer applies. This means that receiving grants or other subsidies for an R&D project does not automatically disqualify the related expenditure from being included in an R&D tax relief claim under the new merged scheme. While subsidies might still be relevant for other tax or accounting purposes, the specific "state aid clash" that impacted SME claims is removed going forward.

However, while the subsidy issue simplifies under the merged scheme, the underlying principles of determining who undertook the qualifying R&D activity (especially in complex subcontracting chains) remain critically important. The questions raised in Quinn, Collins, and Stage One about risk, autonomy, and expertise are still relevant for establishing eligibility in the first place, regardless of the scheme mechanics.

Your Action Plan: Documentation & Dialogue

What does this mean for your business?

The rules around R&D tax relief, especially concerning subcontracting, are dynamic. While the new merged scheme simplifies the specific issue of subsidies, the core challenge of proving eligibility in subcontracting scenarios persists. Staying informed and ensuring your arrangements are clearly documented is the best way to navigate these waters and secure the R&D relief your innovation deserves.

Listen: Karen's Expertise in Navigating R&D Tax Relief